Multiple signaling pathways of VPC fate specification
References
- C. Li*, M. Nagasaki*, K. Ueno and S. Miyano, Simulation-based Model Checking Approach to Cell Fate Determination During Caenorhabditis elegans Vulval Development by Hybrid Functional Petri Net with Extension, BMC Syst Biol., 3:42, 2009 Apr. (*These authors equally contributed to this work).
To read and download the paper, please click here.
Model for the signaling events during vulval induction
Biological diagram of the signaling pathways underlying vulval fate specification
Download Simulation Model
CSML3.0 version: ZIP | CSML [2008-12-02] ("High-speed simulation module" is recommended)
Launch on CIOPlayer [2009-12-25]Launch on CIO [2009-12-25]
Supplemental DATA
- Supplemental All parameters that were used in the VPC fate model with the csv format.
- All entities: entity.csv [2008-12-25]
- All processes: process.csv [2008-12-25]
- All connectors:connector.csv [2008-12-25]
- Supplemental source code used to obtain JA fate patterns with Mocha.
- Source code: Mocha_src.zip [2009-02-23]
- Model checker: Mocha [2009-02-23]
