Models imported from CellML repository

CellML repository distributes curated models of biochemical and cellular systems. Currently, the models can be retrieved in the CellML version 1.1. The conversion of CellML models into CSML allows researchers to reuse these models on the CSML supported platforms.

There are 231 models in Sep. 13, 2006. The conversion is automatically done by using the CellML2CSML converter. The converted results are available to download in the CSML 1.9 and 3.0 formats within the two leftmost columns of each row. Please click the model name which is linked to CellML for the detailed information about each model. Some models did not convert properly because there are some units only allowed in CellML.

CSML
1.9 		CSML
3.0 		Converted total elements
(Entity/Process/Connector)		Model name
180 (170/5/5)adrian_chandler_hodg...
112 (108/2/2)albrecht_colegrove_f...
102 (98/2/2)albrecht_colegrove_h...
386 (364/11/11)aon_cortassa_2002_ve...
944 (868/38/38)asthagiri_lauffenbur...
424 (404/10/10)bakker_mensonides_te...
516 (496/10/10)bakker_michels_opper...
44 (38/3/3)baylor_hollingworth_...
712 (674/19/19)beard_2005_version01
140 (124/8/8)beeler_reuter_1977_v...
24 (20/2/2)ben-tal_2005_version...
-bernus_wilders_zemli...
336 (312/12/12)bertram_arnot_zampon...
120 (112/4/4)bertram_previte_sher...
-bertram_satin_zhang_...
190 (180/5/5)bertram_sherman_2004...
234 (224/5/5)bertram_smolen_sherm...
326 (302/12/12)bhalla_iyengar_1999_...
156 (148/4/4)bindschadler_sneyd_2...
-bondarenko_szigeti_b...
48 (42/3/3)bonhoeffer_rembiszew...
608 (564/22/22)boyett_zhang_garny_h...
152 (144/4/4)butera_rinzel_smith_...
482 (446/18/18)chang_fujita_1999_ve...
210 (190/10/10)chang_fujita_2001_ve...
368 (342/13/13)chassagnole_rais_que...
218 (206/6/6)chay_1997_version01
162 (150/6/6)chay_lee_fan_1995_ve...
1374 (1302/36/36)chen_calzone_csikasz...
388 (362/13/13)chen_csikasz-nagy_gy...
614 (576/19/19)ciliberto_novak_tyso...
362 (336/13/13)ciliberto_petrus_tys...
202 (188/7/7)ciliberto_tyson_2000...
822 (772/25/25)clancy_rudy_2001_ver...
806 (754/26/26)clancy_rudy_2002_ver...
86 (82/2/2)colegrove_albrecht_f...
214 (196/9/9)condorelli_george_20...
528 (504/12/12)cortassa_aon_marban_...
672 (640/16/16)cortassa_aon_winslow...
614 (602/6/6)courtemanche_ramirez...
114 (98/8/8)cronwright_rohwer_pr...
64 (64/0/0)curien_ravanel_dumas...
-dawson_lea_irvine_20...
530 (484/23/23)demir_clark_giles_19...
-demir_clark_giles_19...
56 (56/0/0)demiray_1981_version...
110 (104/3/3)devries_sherman_2000...
98 (92/3/3)devries_sherman_2001...
532 (506/13/13)deyoung_keizer_1992_...
528 (496/16/16)difrancesco_noble_19...
176 (160/8/8)dixit_perelson_2004_...
502 (466/18/18)dokos_celler_lovell_...
128 (114/7/7)drouhard_roberge_198...
638 (606/16/16)dumaine_towbin_bruga...
128 (114/7/7)ebihara_johnson_1980...
120 (110/5/5)evans_errington_shel...
762 (728/17/17)faber_rudy_2000_vers...
404 (388/8/8)fall_keizer_2001_ver...
214 (196/9/9)fallon_lauffenburger...
128 (120/4/4)fenton_karma_1998_ve...
76 (72/2/2)fink_slepchenko_loew...
134 (120/7/7)fink_slepchenko_mora...
52 (48/2/2)fitzhugh_1961_versio...
-flynn_green_pedley_b...
204 (188/8/8)fohlmeister_miller_1...
412 (398/7/7)fridlyand_tamarina_p...
104 (100/2/2)friel_1995_version01
150 (144/3/3)gall_susa_1999_versi...
290 (272/9/9)gardner_dolnik_colli...
162 (154/4/4)goforth_bertram_khan...
144 (134/5/5)goldbeter_1991_versi...
134 (124/5/5)goldbeter_1995_versi...
892 (790/51/51)greenstein_wu_po_tom...
160 (146/7/7)grossman_feinberg_ku...
70 (70/0/0)guccione_mcculloch_w...
90 (82/4/4)halloy_bernard_louss...
260 (236/12/12)hatzimanikatis_lee_b...
256 (250/3/3)haugh_wells_lauffenb...
-hefti_harder_eppenbe...
56 (48/4/4)herz_bonhoeffer_ande...
356 (320/18/18)heyd_drew_2003_versi...
478 (446/16/16)hilemann_noble_1987_...
-hodgkin_huxley_1952_...
392 (376/8/8)hoefnagel_starrenbur...
594 (550/22/22)huang_ferrell_1996_v...
92 (86/3/3)hunter_mcculloch_ter...
22 (22/0/0)hunter_mcnaughton_no...
540 (496/22/22)hynne_dano_sorensen_...
264 (232/16/16)iber_maini_2002_vers...
832 (698/67/67)iyer_mazhari_winslow...
624 (562/31/31)jafri_rice_winslow_1...
462 (426/18/18)joseph_zavros_mercha...
424 (376/24/24)kamp_hell_2000_versi...
-keener_2001_version0...
144 (132/6/6)keizer_levine_1996_v...
-kesmir_deboer_1999_v...
552 (506/23/23)kholodenko_demin_moe...
58 (52/3/3)kirschner_panetta_19...
-kirschner_webb_1996_...
694 (650/22/22)kneller_ramirez_char...
524 (468/28/28)kodama_2000_version0...
72 (68/2/2)komarova_wodarz_2003...
976 (908/34/34)korzeniewski_zoladz_...
756 (696/30/30)kurata_hisatome_iman...
602 (560/21/21)lambeth_kushmerick_2...
184 (174/5/5)lebeau_robson_mckinn...
140 (130/5/5)lebeau_yule_groblews...
516 (478/19/19)leloup_goldbeter_200...
282 (262/10/10)leloup_gonze_goldbet...
78 (74/2/2)li_rinzel_1994_versi...
-lovell_cloherty_cell...
248 (232/8/8)luo_rudy_1991_versio...
596 (568/14/14)luo_rudy_1994_versio...
236 (230/3/3)magnus_keizer_1997_v...
616 (590/13/13)magnus_keizer_1998_v...
-maly_wiley_lauffenbu...
106 (96/5/5)margaridamartins_men...
138 (132/3/3)marhl_haberichter_br...
136 (132/2/2)marhl_schuster_brume...
106 (102/2/2)martinov_vitvitsky_m...
132 (114/9/9)marwan_2003_version0...
1132 (1044/44/44)matsuoka_sarai_kurat...
136 (126/5/5)mazhari_greenstein_w...
252 (232/10/10)mcallister_noble_tsi...
-mckenzie_1998_versio...
780 (698/41/41)michailova_mcculloch...
164 (152/6/6)miftakhov_abdusheva_...
102 (94/4/4)mijailovich_butler_f...
120 (106/7/7)mittler_sulzer_neuma...
304 (276/14/14)mlcek_neumann_kittna...
60 (54/3/3)moore_li_2004_versio...
-mosekilde_lading_yan...
314 (286/14/14)mulquiney_bubb_kuche...
278 (256/11/11)mulquiney_kuchel_199...
182 (164/9/9)nagerl_novo_mody_ver...
106 (100/3/3)nash_panfilov_2004_v...
64 (58/3/3)nelson_murray_perels...
52 (46/3/3)neumann_lam_dahari_g...
108 (96/6/6)nevo_golding_neumann...
92 (84/4/4)noble_1962_version01
488 (458/15/15)noble_noble_1984_ver...
790 (738/26/26)noble_varghese_kohl_...
280 (258/11/11)novak_csikasz-nagy_g...
240 (222/9/9)novak_pataki_ciliber...
376 (350/13/13)novak_tyson_1997_ver...
44 (38/3/3)nowak_bangham_1996_v...
610 (550/30/30)nygren_fiset_firek_c...
310 (276/17/17)olsen_hauser_kummer_...
-oomens_maenhout_vano...
-palecek_horwitz_lauf...
608 (556/26/26)pandit_clark_giles_d...
60 (54/3/3)perelson_neumann_mar...
142 (132/5/5)plant_1981_version01
552 (518/17/17)priebe_beuckelmann_1...
686 (652/17/17)puglisi_bers_2001_ve...
672 (628/22/22)ramirez_nattel_court...
154 (146/4/4)reed_nijhout_sparks_...
658 (584/37/37)ren_samson_sowers_19...
76 (66/5/5)revilla_garcia-ramos...
236 (218/9/9)riccobene_omann_lind...
70 (70/0/0)rice_jafri_winslow_2...
132 (122/5/5)rice_winslow_hunter_...
-rice_winslow_jafri_1...
710 (680/15/15)riemer_sobie_tung_19...
56 (56/0/0)rivlin_saunders_1951...
744 (694/25/25)rizzi_baltes_reuss_1...
76 (72/2/2)rogers_mcculloch_199...
-sachse_glanzel_seema...
146 (132/7/7)saftenku_williams_si...
830 (786/22/22)salem_saidel_stanley...
172 (158/7/7)sarkar_lauffenburger...
406 (332/37/37)saucerman_brunton_mi...
146 (142/2/2)saucerman_mcculloch_...
506 (474/16/16)schepper_2000_versio...
94 (88/3/3)schuster_beny_meiste...
592 (542/25/25)sedaghat_sherman_quo...
-seemann_sachse_weib_...
958 (882/38/38)shannon_wang_puglisi...
738 (708/15/15)shaw_rudy_1997_versi...
336 (312/12/12)shiferaw_watanabe_ga...
230 (218/6/6)shorten_robson_mckin...
260 (246/7/7)shorten_wall_2000_ve...
130 (116/7/7)skouibine_trayanova_...
118 (112/3/3)smith_crampin_2004_v...
184 (172/6/6)sneyd_dufour_2002_ve...
-sneyd_tsaneva-atanas...
234 (218/8/8)sneyd_tsaneva-atanas...
234 (212/11/11)snyder_palmer_moore_...
-sobie_dilly_dossanto...
1070 (1026/22/22)spiro_parkinson_othm...
346 (320/13/13)starbuck_wiley_lauff...
128 (118/5/5)stern_song_sham_yang...
86 (76/5/5)stilianakis_dietz_sc...
-surkis_peskin_tranch...
22 (20/1/1)swanson_true_lin_buh...
148 (138/5/5)takahashi_cannon_200...
552 (518/17/17)tentusscher_noble_no...
860 (812/24/24)teusink_passarge_rei...
208 (186/11/11)thomsen_neubig_1989_...
122 (110/6/6)tolic_mosekilde_stur...
46 (40/3/3)topp_promislow_devri...
268 (250/9/9)tyson_1991_version01
300 (282/9/9)ueda_hagiwara_kitano...
68 (64/2/2)vancapelle_durrer_19...
300 (278/11/11)vangoor_lebeau_krsma...
426 (396/15/15)vaseghi_baumeister_r...
-vendelin_kongas_saks...
168 (150/9/9)vilar_kueh_barkai_le...
754 (722/16/16)viswanathan_shaw_rud...
424 (378/23/23)vojtek_der_1998_vers...
74 (66/4/4)wanant_quon_2000_ver...
632 (558/37/37)wang_2002_version01
96 (88/4/4)wang_krueger_buja_20...
350 (336/7/7)warashina_ogura_2004...
458 (420/19/19)weinstein_1998_versi...
152 (140/6/6)westermark_lansner_2...
52 (48/2/2)wilkins_sneyd_1998_v...
698 (632/33/33)winslow_rice_jafri_m...
-wodarz_2003_version0...
66 (58/4/4)wodarz_jansen_2003_v...
78 (70/4/4)wodarz_nowak_1999_ve...
216 (202/7/7)wolf_heinrich_2000_v...
268 (250/9/9)wolf_passarge_somsen...
430 (404/13/13)wolf_sohn_heinrich_k...
562 (532/15/15)yang_clark_bryan_rob...
484 (466/9/9)yi_fogelson_keener_p...
698 (668/15/15)zeng_laurita_rosenba...
462 (432/15/15)zhang_holden_kodama_...
464 (408/28/28)zhu_2000_version01